Gospels in Conflict: John and Thomas

Jesus said: 'If you bring forth what is within you, what you bring forth will save you. If you do not bring forth what is within you, what you do not bring forth will destroy you.'"
The strength of this saying is that it does not tell us what to believe but challenges us to discover what lies hidden within ourselves; and, with a shock of recognition, I realized that this perspective seemed to me self-evidently true.
Abstract
This paper examines the theological and historical tensions between canonical and non-canonical Christian texts as presented in Elaine Pagels' Beyond Belief: The Secret Gospel of Thomas. Through a close reading of Pagels' personal and scholarly narrative, it analyzes the dichotomous portrayals of religious authority, salvation, and the nature of Christ in the Gospel of John and the Gospel of Thomas. It argues that Pagels' work demonstrates how the early Christian movement's consolidation of a unified orthodoxy—epitomized by John's gospel—involved the systematic suppression of alternative, often introspective and mystical traditions like those found in Thomas. The paper concludes that Pagels' scholarship challenges not only historical understandings of early Christianity but also invites a contemporary re-evaluation of the relationship between institutional belief and personal spiritual discovery.
Introduction: The Personal as Scholarly Method
Elaine Pagels' Beyond Belief (2003) is a work of scholarship that deftly intertwines historiographic analysis with autobiographical reflection. Her narrative begins with a formative religious experience centered on the Gospel of John, which offered community and certitude, but at the cost of exclusivity and a rigid boundary between the saved and the condemned. This personal disillusionment becomes the engine for a scholarly quest: to recover the diverse spectrum of early Christian thought marginalized by the developing orthodox canon.
Pagels' methodology is significant; she uses her own spiritual seeking as a lens to examine the ancient conflict between the inclusive, dogmatic structure represented by John and the introspective, knowledge-focused path exemplified by the apocryphal Gospel of Thomas. This paper will analyze the core theological contrasts Pagels identifies, explore the historical process of canonization she describes, and assess the implications of her work for understanding early Christian diversity.
The Johannine-Thomasine Dichotomy: Belief vs. Self-Knowledge
At the heart of Pagels' analysis is a stark contrast between the theological programs of the Gospel of John and the Gospel of Thomas. She identifies John as the foundational text for creedal, institutional Christianity. Its prologue establishes the divine Logos made flesh, a unique incarnation demanding belief: "that you may believe that Jesus is the Christ, the Son of God, and that by believing you may have life in his name" (John 20:31). Salvation is contingent upon correct belief in the singular person of Jesus, creating a binary worldview of believers and those "condemned already" (John 3:18).
In direct contrast, the Gospel of Thomas, as Pagels presents it, de-emphasizes belief in a singular external event or person in favor of internal discovery. The saying that struck her with "self-evident" truth encapsulates this ethos. Here, salvation is an ontological process of actualizing one's innate divine potential, not a forensic result of affirming a proposition. Jesus in Thomas acts less as a unique object of faith and more as a guide who points disciples toward the "light within a person of light."
| Gospel of John | Gospel of Thomas |
|---|---|
| Christology: Jesus as unique, pre-existent divine Logos made flesh | Christology: Jesus as revealer who points to divine light present in all |
| Salvation: Through belief in Jesus as Christ and Son of God | Salvation: Through self-knowledge and bringing forth what is within |
| Community: Defined by belief/unbelief binary; exclusive "flock" | Community: Individual seekers discovering divine spark within |
| Kingdom of God: Future eschatological hope | Kingdom of God: Present reality to be recognized here and now |
| Authority: Centered on apostolic witness to unique incarnation | Authority: Located in individual's capacity for gnosis (knowledge) |
Pagels notes that both gospels claim to convey Jesus' "secret teachings," yet they direct these secrets in "sharply different directions." John's secret is the exclusive, metaphysical identity of Jesus as the only conduit to the Father. Thomas's secret is the inclusive, immanent divine potential within each person. The conflict, therefore, is not between historical narrative and myth, but between two competing mystical visions: one centripetal, focusing all divinity into Christology to create a unified community; the other centrifugal, disseminating the divine spark into all seekers, potentially undermining centralized authority.
The Historical Construction of Orthodoxy and the Suppression of Alternatives
Pagels' personal discovery of the Nag Hammadi library at Harvard mirrors the broader scholarly revolution these texts prompted. Her initial expectation, shaped by Irenaeus's condemnation of such writings as "an abyss of madness," was to find heresy and confusion. Instead, she found spiritually potent alternatives. This experience frames her historical argument: what became "orthodoxy" was not an obvious, pre-existing truth but a constructed consensus achieved through political, social, and theological struggle.
She details how church fathers like Irenaeus (c. 180 CE), facing internal diversity and external persecution, actively worked to consolidate Christian identity. This involved establishing a canonical boundary (the four-fold gospel), a creedal standard (the Rule of Faith), and a hierarchical authority structure. Texts like Thomas, which emphasized personal spiritual attainment over communal creedal assent, were antithetical to this project. As Pagels states, "the Gospel of John helped provide a foundation for a unified church, which Thomas, with its emphasis on each person's search for God, did not." The Johannine framework, with its clear lines of belief/unbelief and its high Christology, provided a powerful tool for defining community borders and doctrinal conformity.
The suppression of texts like Thomas was thus not merely a matter of theological preference but a practical strategy for survival and cohesion. Pagels suggests that the institutional church, in its formative centuries, chose the path of unified belief—with its potential for exclusion and dogmatism—over the path of pluralistic seeking, which risked fragmentation. The rediscovery of these texts in the 20th century forces a re-examination of this historical choice and exposes the "diversity within the Christian movement that later, 'official' versions of Christian history had suppressed."
Implications and Conclusion: Recovering a Suppressed Sensibility
Pagels' work, culminating in Beyond Belief, has profound implications. First, it historicizes Christian doctrine, showing that central tenets like the full divinity of Jesus were contested and gradually solidified, with John playing a decisive role. Her observation that titles like "Son of God" were originally human designations, later capitalized and reinterpreted through a Johannine lens, challenges the perception of a static, unified early belief.
Second, she recovers a suppressed religious sensibility—one that values internal exploration and self-knowledge alongside, or even above, doctrinal belief. This resonates with modern seekers who, like Pagels, may find traditional frameworks of sin, exclusive salvation, and mandatory creedal assent spiritually limiting. The Gospel of Thomas offers a vision of Christianity that is more akin to wisdom tradition or mysticism, where the goal is not merely to believe in Christ but to realize the Christ-like potential within.
Finally, Pagels' integration of the personal and the scholarly legitimizes subjective experience as a valid starting point for historical inquiry. Her journey from devotional reading of John to critical scholarship on Thomas is itself a model of the gnostic seeker she describes: bringing forth what is within through questioning, challenging, and discovering.
In conclusion, Elaine Pagels' Beyond Belief uses the interplay between the Gospel of John and the Gospel of Thomas to illuminate a pivotal fork in the road of early Christian history. By juxtaposing the exclusive, belief-centered orthodoxy that prevailed with the inclusive, knowledge-centered heterodoxy that was suppressed, she does more than reconstruct ancient debates. She invites a contemporary conversation about the sources of religious authority and the pathways to the divine, suggesting that the texts lost for centuries may speak directly to the spiritual dilemmas of the present.
References
- Pagels, Elaine. Beyond Belief: The Secret Gospel of Thomas. New York: Random House, 2003.
- Pagels, Elaine. The Gnostic Gospels. New York: Random House, 1979.
- Robinson, James M., ed. The Nag Hammadi Library in English. 3rd ed. San Francisco: Harper & Row, 1988.
- Irenaeus of Lyons. Against Heresies.
- Biblical references: Gospel of John, Gospel of Thomas
Note: This academic paper is based on analysis of Elaine Pagels' work as presented in the provided excerpts from Beyond Belief: The Secret Gospel of Thomas and accompanying book review material.

I have always read the Gospel of John with fascination, and often with devotion. When I was fourteen, and had joined an evangelical Christian church, I found in the enthusiastic and committed gatherings and in John's gospel, which my fellow Christians treasured, what I then craved—the assurance of belonging to the right group, the true "flock" that alone belonged to God. Like many people, I regarded John as the most spiritual of the four gospels, for in John, Jesus is not only a man but a mysterious, superhuman presence, and he tells his disciples to "love one another."[1] At the time, I did not dwell on disturbing undercurrents—that John alternates his assurance of God's gracious love for those who "believe" with warnings that everyone who "does not believe is condemned already"[2] to eternal death. Nor did I reflect on those scenes in which John says that Jesus (p.31) spoke of his own people ("The Jews") as if they were alien to him and the devil's offspring.[3]Before long, however, I learned what inclusion cost: the leaders of the church I attended directed their charges not to associate with outsiders, except to convert them. Then, after a close friend was killed in an automobile accident at the age of sixteen, my fellow evangelicals commiserated but declared that, since he was Jewish and not "born again," he was eternally damned. Distressed and disagreeing with their interpretation—and finding no room for discussion—I realized that I was no longer at home in their world and left that church. When I entered college, I decided to learn Greek in order to read the New Testament in its original language, hoping to discover the source of its power. Reading these terse, stark stories in Greek, I experienced the gospels in a new way, often turning the page to see what happened next, as if I had never read them before. Reading Greek also introduced me firsthand to the poems of Homer, the plays of Sophocles and Aeschylus, Pindar's hymns, and Sappho's invocations; and I began to see that many of these "pagan" writings are also religious literature, but of a different religious sensibility.
After college I studied dance at the Martha Graham School in New York. I loved dance but still wondered what it was about Christianity that I had found so compelling and at the same time so frustrating. I decided to look for the "real Christianity"—believing, as Christians traditionally have, that I might find it by immersing myself in the earliest Christian sources, composed soon after Jesus and his disciples had wandered in Galilee. When I entered the Harvard doctoral program, I was astonished to hear from the other students that Professors Helmut Koester and George MacRae, who taught the early history of Christianity, had file cabinets filled with "gospels" and "Apocrypha" written during the first centuries, many of them secret writings of which I'd never heard. These writings, containing sayings, rituals, and dialogues attributed to Jesus and his disciples, were found in 1945 among a cache of texts from the beginning of the Christian era, unearthed near Nag Hammadi in Upper Egypt.[4] When my fellow students and I investigated these sources, we found that they revealed diversity within the Christian movement that later, "official" versions of Christian history had suppressed so effectively that only now, in the Harvard graduate school, did we hear about them. So we asked who wrote these alternative gospels, and when. And how do these relate to—and differ from—the gospels and other writings familiar from the New Testament?
These discoveries challenged us not only intellectually but—in my case at least—spiritually. I had come to respect the work of "church fathers" such as Irenaeus, bishop of Lyons (c.180), who had denounced such secret writings as "an abyss of madness, and blasphemy against Christ."[5] Therefore I expected these recently discovered texts to be garbled, pretentious, and trivial. Instead I was surprised to find in some of them unexpected spiritual power—in sayings such as this from the Gospel of Thomas, translated by Professor MacRae:
"Jesus said: 'If you bring forth what is within you, what you bring forth will save you. If you do not bring forth what is within you, what you do not bring forth will destroy you.'"[6]The strength of this saying is that it does not tell us what to believe but challenges us to discover what lies hidden within ourselves; and, with a shock of recognition, I realized that this perspective seemed to me self-evidently true.
Notes:
This chapter condenses and summarizes research that is presented in a fuller and more technical form as Elaine Pagels, "Exegesis of Genesis 1 in the Gospels of Thomas and John," Journal of Biblical Literature 118 (1999), 477-496.
[1] John 15:12,17.
[2] John 3:18.
[3] John 8:44. For discussion and references on how John's gospel, as well as the others, portrays "The Jews," see Elaine Pagels, The Origin of Satan (New York, 1995), especially 89-111, and the references cited there.
[4] For the authoritative account of the story of the discovery, see James M. Robinson, "The Discovery of the Nag Hammadi Codices," Biblical Archaeologist 42 (1979), 206-224.
[5] Irenaeus, AH 1, Praefatio.
[6] Gospel of Thomas 70, in Nag Hammadi Library (hereafter NHL) 126, where this difficult passage is translated differently and, in my view, less lucidly. Throughout the present text, I have taken liberties with NHL translations in the interest of clarity or of preserving the poetic quality of the original text; thus, readers who consult the NHL may note variations.
Elaine Pagels and the Gospel of Thomas
Book ReviewBeyond Belief: The Secret Gospel of Thomas
by Elaine Pagels
published 2003 by Random House, New York
Elaine Pagels, professor of religion at Princeton University, became famous—well, at least well known—with the publication of her book, The Gnostic Gospels, in 1979. She has written several other books as well on the history of Christianity, establishing her as the foremost popular scholar in the field.
Beyond Belief, published in 2003 by Random House, is a sort of sequel to The Gnostic Gospels, in that it incorporates the new scholarship that has come to light since that book was published. Since Ms. Pagels' infant son was diagnosed with fatal pulmonary hypertension, her pursuit of knowledge about who Jesus really was has become a question of personal urgency for her. This need is reflected in the text and transforms the book into much more than a scholarly treatise for the curious. She wants to know what Christ meant to his followers before doctrine and dogmas, in other words, before Christianity was invented by the Church.
The discovery of the Gospel of Thomas, along with other early Christian texts, offers revealing clues. Pagels compares Thomas's gospel (which claims to give Jesus' secret teaching, and indicates an affinity with the Kabbalah) with the canonic texts to show how the early Church chose to include some gospels and exclude others from the collection we know as the New Testament—and why. During the time of persecution of Christians, the church fathers constructed the canon, creed and hierarchy, suppressing many of its spiritual resources in the process, in order to avoid conflict with Roman law and religion.
A prime example is the label of heresy attached to the Gospel of Thomas, and its subsequent suppression. If a copy hadn't been found by accident (or destiny?) in the caves of Nag Hammadi, along with many other documents during the middle of the twentieth century, we'd have never even known of its existence. Such secret writings had been denounced by Irenaeus, bishop of Lyon (c.180) as "an abyss of madness, and blasphemy against Christ." Pagels had therefore expected to find madness and blasphemy in these texts, but when she first studied them in Harvard graduate school she found the contrary in sayings such as this from Thomas:
Pagels found that "the strength of this saying is that it does not tell us what to believe but challenges us to discover what lies hidden within ourselves; and, with a shock of recognition, I realized that this perspective seemed to me to be self-evidently true."
However, certain church leaders from the second through the fourth centuries rejected many of these sources of revelation and constructed instead the New Testament gospel canon of Matthew, Mark, Luke and John, which has defined Christianity to this day. The Gospel of John is of special importance in church dogma, and its basic tenets seem to be in direct opposition to Thomas. John says that he writes "so that you may believe, and believing may have life in [Jesus'] name." Thomas's gospel, however, encourages us not so much to believe in Jesus, as John demands, as to seek to know God through one's own, divinely given capacity, since all are created in the image of God. "For Christians of later generations, the Gospel of John helped provide a foundation for a unified church, which Thomas, with its emphasis on each person's search for God, did not."
According to Pagels, John is the only evangelist who actually states that Jesus is God incarnated. But not only Pagels says so. In one of his commentaries on John, Origen—a church father (c.240)—writes that while the other gospels describe Jesus as human, "none of them clearly spoke of his divinity, as John does." One may object that the other three, synoptic ("seeing together") gospels call Jesus "son of God", and this is virtually the same thing. But such titles (son of God, messiah) in Jesus' time designated human, not divine roles. When translated into English fifteen centuries later, these were capitalized—a linguistic convention that does not occur in the original Greek. When all four gospels, together with Paul's letters, were united in the New Testament (c. 160 to 360) most Christians had come to read all four through John's lens, that Jesus is "Lord and God."
Pagels feels that if the Gospel of Thomas were included in the New Testament instead of that of John, or even if it were included along with John, the development of Christianity would have been quite different. Whereas Mark, Matthew and Luke identify Jesus as God's human agent, John and Thomas characterize him as God's own light in human form. Both claim to reveal, at least to a certain extent, Jesus' "secret teachings", and assume that their readers are already familiar with the synoptic gospels.
Despite their similarities, John and Thomas point the secret teachings in sharply different directions. John claims that we can experience God only through the divine light embodied in Jesus, while Thomas says that the divine light embodied in Jesus is already shared by humanity since we are all made "in the image of God." Thomas thus expresses what would become a central theme of Jewish, and later Christian, mysticism a thousand years later: that the "image of God" is hidden within everyone, and it is a question of recognizing this and finding it through one's own efforts.
(On the question of Jesus' divinity, Rudolf Steiner—not consulted by Pagels—offered an interesting solution: that Jesus was indeed a human being, but that "a god", Christ, incarnated in him at the moment of baptism in the Jordan.)
At one point in her description of the dispute among the early Christians about who Jesus really was, Pagels quotes Mark: "...he asked his disciples, 'Who do people say that I am?' And they told him, 'John the Baptist; and others say Elijah; and others, one of the prophets.' And he asked them, 'But who do you say that I am?' Peter answered him, 'You are the messiah.'" In view of this passage, it has always seemed contradictory to me the contention that Christianity—and Judaism—do not embrace the idea of reincarnation, even reject it, when these first Jewish Christians seem to act as though it were common knowledge.
The synoptic gospels claim that Jesus' teaching predicted the coming of the kingdom of God some time in the future, an interpretation still adhered to by many Christians. However, both John and Thomas say something different, the latter very specifically:
"His disciples said to him, 'When will the resurrection of the dead come, and when will the new world come?' He said to them, 'What you look forward to has already come, but you do not recognize it.'"
Though the Gospel of Luke includes an alternative version of the same idea ("...the kingdom of God is within you"), Luke later retreats from this position and concludes with the apocalyptic warning that the Son of Man is not a divine presence in us all but a terrifying judge.
A century ago Leo Tolstoy, in his monumental The Kingdom of God is within you, urged Christians to give up coercion and violence in order to realize God's kingdom here and now. Thomas Merton, the twentieth century writer and Trappist monk, agreed with Tolstoy but interpreted his kingdom mystically rather then practically. We are confronted here with the Catholic church's insistence that humanity is sinful, base and unworthy by nature and that salvation from the pangs of hell is only possible through faith in Jesus and, by obvious extension, his church, and his representative on earth, the pope. But the Gospel of Thomas leaves spiritual destiny up to each individual. There Jesus treats us as equals, or at least as struggling siblings.
Finally, after so many centuries, the heretics are having their say. Another most interesting document found at Nag Hammadi is the Gospel of Philip, who explains baptism. Sometimes the person who receives baptism "receives the holy spirit...this is what happens when one experiences a mystery." Divine grace, this implies, isn't sufficient; the initiate's capacity for spiritual understanding is also a factor. "Faith is our earth, in which we take root; hope is the water through which we are nourished; love is the air through which we grow; gnosis is the light through which we become fully grown."


